Dicomifier – A medical image converter

Dicomifier is a set of tools to convert Bruker data to DICOM files, and DICOM files to NIfTI. It retains meta-data (e.g. MR parameters such as echo time or subject parameters such as weight or height) throughout the conversion process, and aligns the meta-data from Bruker on the DICOM dictionary for unified processing pipelines.

Getting started? Have a look at the installation instructions and basic usage. If you’re in a hurry and have Anaconda installed, conda install -c conda-forge dicomifier should get you going.

Need to know more about your options and arguments? The commands reference is for you.

Want to find out how it works? The API reference is a good place to start, followed by the source code.

Interested in how the vendors store diffusion MRI meta-data? There is a section just for you.

Using the software? No citation is mandatory, but it is always appreciated. See the entry on Zenodo for details.

Indices and tables