diffusion-scheme#

Convert dMRI meta-data stored in JSON (aliases: diffusion, diff).

Usage:

dicomifier diffusion-scheme [options] source format [destination ...]

Arguments#

source#

Source JSON file

format#

Output format, among:

  • mrtrix

  • fsl

[destination ...]#

Output files, depends on the output format

  • mrtrix: single scheme file

  • fsl: the bvecs and bvals files, in that order

Options#

-i <image>, --image <image>#

Image file for formats using image-based direction coordinates. Mandatory for formats using image-based direction coordinates, optional but recommended in other cases

-v <level>, --verbose <level>#

Verbosity level (warning, info, or debug)